Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 AC112482.1-201ENST00000492080 688 ntBASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 YBX1P5-201ENST00000509441 847 ntBASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 AC055717.3-201ENST00000622967 595 ntBASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 KRT8P37-201ENST00000451609 1420 ntBASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF11Q9Y3C5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 ALG1L8P-201ENST00000533887 760 ntBASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 AC010327.4-202ENST00000591484 748 ntBASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF11Q9Y3C5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 AL627223.1-201ENST00000416693 442 ntBASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 KRT18P32-201ENST00000424695 1287 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms