Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 AC093214.1-201ENST00000511688 1107 ntBASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 IGHV3-62-201ENST00000520057 340 ntBASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 TUBB3P1-201ENST00000405796 1332 ntBASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 SPDYE14P-201ENST00000442619 822 ntBASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 EIF2S2P5-201ENST00000457635 968 ntBASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 SLC25A39P2-201ENST00000537614 270 ntBASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 AC026150.2-201ENST00000564693 1156 ntBASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 MIR4745-201ENST00000577608 62 ntBASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 AP001542.1-201ENST00000591314 200 ntBASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 CICP24-201ENST00000605464 2705 ntBASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 WASH6P-202ENST00000359512 1437 ntBASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 AC009090.5-201ENST00000624886 2285 ntBASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RABGEF1Q9UJ41 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RABGEF1Q9UJ41 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.24■□□□□ 0.19
RABGEF1Q9UJ41 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RABGEF1Q9UJ41 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RABGEF1Q9UJ41 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RABGEF1Q9UJ41 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RABGEF1Q9UJ41 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RABGEF1Q9UJ41 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RABGEF1Q9UJ41 FAM45BP-202ENST00000592932 1624 ntBASIC16.24■□□□□ 0.19
RABGEF1Q9UJ41 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RABGEF1Q9UJ41 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms