Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 RPL13P2-201ENST00000440687 659 ntBASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 ZNF890P-202ENST00000530367 1156 ntBASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SMC4Q9NTJ3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.2■□□□□ 0.83
SMC4Q9NTJ3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SMC4Q9NTJ3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 TMBIM7P-203ENST00000641617 1718 ntBASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.2■□□□□ 0.82
SMC4Q9NTJ3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 AC008738.7-201ENST00000609744 511 ntBASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.19■□□□□ 0.82
SMC4Q9NTJ3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms