Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.16■□□□□ 0.18
SP110Q9HB58 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.16■□□□□ 0.18
SP110Q9HB58 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.16■□□□□ 0.18
SP110Q9HB58 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.16■□□□□ 0.18
SP110Q9HB58 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.16■□□□□ 0.18
SP110Q9HB58 AC009477.1-201ENST00000452936 217 ntBASIC16.16■□□□□ 0.18
SP110Q9HB58 INGX-202ENST00000489074 768 ntBASIC16.16■□□□□ 0.18
SP110Q9HB58 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.16■□□□□ 0.18
SP110Q9HB58 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.16■□□□□ 0.18
SP110Q9HB58 ZNF890P-202ENST00000530367 1156 ntBASIC16.16■□□□□ 0.18
SP110Q9HB58 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.16■□□□□ 0.18
SP110Q9HB58 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.16■□□□□ 0.18
SP110Q9HB58 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
SP110Q9HB58 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.16■□□□□ 0.18
SP110Q9HB58 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.16■□□□□ 0.18
SP110Q9HB58 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.16■□□□□ 0.18
SP110Q9HB58 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.16■□□□□ 0.18
SP110Q9HB58 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SP110Q9HB58 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SP110Q9HB58 Z97205.2-201ENST00000564697 1639 ntBASIC16.16■□□□□ 0.18
SP110Q9HB58 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP110Q9HB58 HYMAI-201ENST00000635591 3347 ntBASIC16.16■□□□□ 0.18
SP110Q9HB58 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SP110Q9HB58 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.15■□□□□ 0.18
SP110Q9HB58 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SP110Q9HB58 AL513477.1-201ENST00000602865 2407 ntBASIC16.15■□□□□ 0.18
SP110Q9HB58 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.15■□□□□ 0.18
SP110Q9HB58 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SP110Q9HB58 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SP110Q9HB58 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SP110Q9HB58 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.15■□□□□ 0.18
SP110Q9HB58 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.15■□□□□ 0.18
SP110Q9HB58 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SP110Q9HB58 AC011467.4-201ENST00000594891 528 ntBASIC16.15■□□□□ 0.18
SP110Q9HB58 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SP110Q9HB58 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.15■□□□□ 0.18
SP110Q9HB58 AC092127.1-201ENST00000567093 3455 ntBASIC16.15■□□□□ 0.18
SP110Q9HB58 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.15■□□□□ 0.18
SP110Q9HB58 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
SP110Q9HB58 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SP110Q9HB58 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP110Q9HB58 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SP110Q9HB58 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
SP110Q9HB58 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SP110Q9HB58 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.14■□□□□ 0.17
SP110Q9HB58 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.14■□□□□ 0.17
SP110Q9HB58 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SP110Q9HB58 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.14■□□□□ 0.17
SP110Q9HB58 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SP110Q9HB58 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.14■□□□□ 0.17
SP110Q9HB58 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SP110Q9HB58 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SP110Q9HB58 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.14■□□□□ 0.17
SP110Q9HB58 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.14■□□□□ 0.17
SP110Q9HB58 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms