Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 USP9YP2-201ENST00000504503 1000 ntBASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 USP9YP1-201ENST00000513521 1002 ntBASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 RN7SL190P-201ENST00000582519 257 ntBASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 AC244093.1-201ENST00000610837 814 ntBASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
SCAF1Q9H7N4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
SCAF1Q9H7N4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 AC009477.1-201ENST00000452936 217 ntBASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 AC087163.2-201ENST00000457299 853 ntBASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 RN7SL837P-201ENST00000463010 287 ntBASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 AC009407.1-201ENST00000568958 598 ntBASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 MIR6727-201ENST00000620702 65 ntBASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
SCAF1Q9H7N4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 REXO1L11P-201ENST00000620964 1927 ntBASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 PPP1R26P4-201ENST00000619065 3527 ntBASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 AC087499.6-201ENST00000411576 835 ntBASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 AC027307.2-201ENST00000591252 911 ntBASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCAF1Q9H7N4 AC106881.1-201ENST00000605849 3329 ntBASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 CICP24-201ENST00000605464 2705 ntBASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms