Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 NFIC-211ENST00000641145 8399 ntBASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 PTCHD3P3-201ENST00000403073 906 ntBASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 GPX1P2-201ENST00000429271 606 ntBASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 BX005266.1-201ENST00000473402 457 ntBASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLIRPQ9GZT3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 SNORA78-201ENST00000459373 127 ntBASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 AC114341.1-201ENST00000618070 349 ntBASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 AC023090.2-201ENST00000625182 2110 ntBASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms