Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABARAPL3Q9BY60 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 AC005840.4-201ENST00000541242 2494 ntBASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 HCG4P8-203ENST00000443049 980 ntBASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 AC023141.13-201ENST00000604991 943 ntBASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 SPTSSB-204ENST00000617024 1292 ntBASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 AL161645.1-201ENST00000622716 1255 ntBASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GABARAPL3Q9BY60 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GABARAPL3Q9BY60 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GABARAPL3Q9BY60 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
GABARAPL3Q9BY60 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
GABARAPL3Q9BY60 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.33□□□□□ -0.11
GABARAPL3Q9BY60 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.33□□□□□ -0.11
GABARAPL3Q9BY60 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
GABARAPL3Q9BY60 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 AC007064.4-201ENST00000637740 555 ntBASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GABARAPL3Q9BY60 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GABARAPL3Q9BY60 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.32□□□□□ -0.12
GABARAPL3Q9BY60 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
GABARAPL3Q9BY60 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GABARAPL3Q9BY60 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GABARAPL3Q9BY60 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABARAPL3Q9BY60 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms