Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 AC090616.6-203ENST00000579186 1945 ntBASIC14.88□□□□□ -0.03
TREX2Q9BQ50 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 REXO1L1P-202ENST00000608646 1974 ntBASIC14.88□□□□□ -0.03
TREX2Q9BQ50 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 FAM220BP-201ENST00000377689 816 ntBASIC14.88□□□□□ -0.03
TREX2Q9BQ50 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 AC140878.1-201ENST00000565277 250 ntBASIC14.88□□□□□ -0.03
TREX2Q9BQ50 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 AC023157.3-201ENST00000619086 2088 ntBASIC14.88□□□□□ -0.03
TREX2Q9BQ50 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TREX2Q9BQ50 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 AC126755.1-201ENST00000525846 6405 ntBASIC14.87□□□□□ -0.03
TREX2Q9BQ50 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 MIR346-201ENST00000362234 95 ntBASIC14.87□□□□□ -0.03
TREX2Q9BQ50 AC004987.2-201ENST00000395959 1148 ntBASIC14.87□□□□□ -0.03
TREX2Q9BQ50 MIR943-201ENST00000401286 94 ntBASIC14.87□□□□□ -0.03
TREX2Q9BQ50 AC107890.1-201ENST00000422478 521 ntBASIC14.87□□□□□ -0.03
TREX2Q9BQ50 KRT18P32-201ENST00000424695 1287 ntBASIC14.87□□□□□ -0.03
TREX2Q9BQ50 RNA5SP410-201ENST00000516285 106 ntBASIC14.87□□□□□ -0.03
TREX2Q9BQ50 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.87□□□□□ -0.03
TREX2Q9BQ50 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 AP002414.2-201ENST00000591780 3365 ntBASIC14.86□□□□□ -0.03
TREX2Q9BQ50 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TREX2Q9BQ50 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms