Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.58□□□□□ -0.08
CNOT9Q92600 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT9Q92600 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT9Q92600 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CNOT9Q92600 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.58□□□□□ -0.08
CNOT9Q92600 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.58□□□□□ -0.08
CNOT9Q92600 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.58□□□□□ -0.08
CNOT9Q92600 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.58□□□□□ -0.08
CNOT9Q92600 MTND6P24-201ENST00000440466 518 ntBASIC14.58□□□□□ -0.08
CNOT9Q92600 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT9Q92600 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT9Q92600 HNRNPUP1-201ENST00000554987 333 ntBASIC14.58□□□□□ -0.08
CNOT9Q92600 SNHG9-202ENST00000564014 471 ntBASIC14.58□□□□□ -0.08
CNOT9Q92600 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT9Q92600 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
CNOT9Q92600 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 AC097359.3-201ENST00000603982 1210 ntBASIC14.58□□□□□ -0.08
CNOT9Q92600 AP001059.3-201ENST00000619053 235 ntBASIC14.58□□□□□ -0.08
CNOT9Q92600 AC007326.2-201ENST00000624224 7579 ntBASIC14.58□□□□□ -0.08
CNOT9Q92600 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.58□□□□□ -0.08
CNOT9Q92600 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT9Q92600 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CNOT9Q92600 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CNOT9Q92600 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CNOT9Q92600 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT9Q92600 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT9Q92600 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CNOT9Q92600 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.57□□□□□ -0.08
CNOT9Q92600 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CNOT9Q92600 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.57□□□□□ -0.08
CNOT9Q92600 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CNOT9Q92600 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CNOT9Q92600 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CNOT9Q92600 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.57□□□□□ -0.08
CNOT9Q92600 DNAJB3-202ENST00000449667 1266 ntBASIC14.57□□□□□ -0.08
CNOT9Q92600 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.57□□□□□ -0.08
CNOT9Q92600 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.57□□□□□ -0.08
CNOT9Q92600 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.57□□□□□ -0.08
CNOT9Q92600 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.57□□□□□ -0.08
CNOT9Q92600 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.57□□□□□ -0.08
CNOT9Q92600 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.57□□□□□ -0.08
CNOT9Q92600 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CNOT9Q92600 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.57□□□□□ -0.08
CNOT9Q92600 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CNOT9Q92600 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.57□□□□□ -0.08
CNOT9Q92600 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.57□□□□□ -0.08
CNOT9Q92600 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT9Q92600 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT9Q92600 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT9Q92600 AP002414.2-201ENST00000591780 3365 ntBASIC14.56□□□□□ -0.08
CNOT9Q92600 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.56□□□□□ -0.08
CNOT9Q92600 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT9Q92600 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT9Q92600 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT9Q92600 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT9Q92600 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.56□□□□□ -0.08
CNOT9Q92600 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CNOT9Q92600 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT9Q92600 SPDYE17-201ENST00000412399 783 ntBASIC14.56□□□□□ -0.08
CNOT9Q92600 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.56□□□□□ -0.08
CNOT9Q92600 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.56□□□□□ -0.08
CNOT9Q92600 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT9Q92600 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms