Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 AC092850.2-201ENST00000623821 2697 ntBASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 AC007274.1-201ENST00000439805 662 ntBASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 API5-211ENST00000534695 560 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 AC104794.3-201ENST00000566840 1248 ntBASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 DBET-201ENST00000630918 3363 ntBASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC33Q8N5R6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC33Q8N5R6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC33Q8N5R6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC33Q8N5R6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CCDC33Q8N5R6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CCDC33Q8N5R6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC33Q8N5R6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC33Q8N5R6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 AL353779.1-201ENST00000434793 351 ntBASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 RN7SL618P-201ENST00000477850 296 ntBASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 CU639417.3-201ENST00000624240 1404 ntBASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 AC144831.1-201ENST00000573312 2656 ntBASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CCDC33Q8N5R6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms