Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
CCDC82Q8N4S0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC82Q8N4S0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC82Q8N4S0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 LINC00554-201ENST00000564841 3011 ntBASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC82Q8N4S0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 SDHAP3-202ENST00000515467 728 ntBASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 AC135586.1-201ENST00000539323 574 ntBASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 SPCS2P1-201ENST00000561636 679 ntBASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 AC011467.4-201ENST00000594891 528 ntBASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 AC004461.2-201ENST00000629517 803 ntBASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC82Q8N4S0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 NORAD-201ENST00000565493 5339 ntBASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 AC136604.1-201ENST00000418535 575 ntBASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC82Q8N4S0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 TSPY16P-201ENST00000449843 468 ntBASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 AL096865.1-201ENST00000606796 927 ntBASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC82Q8N4S0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms