Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 GAPDHP21-201ENST00000450301 1010 ntBASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 TERF1P3-201ENST00000505638 1227 ntBASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 AC011270.2-201ENST00000624293 2550 ntBASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCUBE3Q8IX30 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 AL589987.1-201ENST00000453380 819 ntBASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 TIMM17BP1-201ENST00000545713 516 ntBASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 SRD5A3P1-201ENST00000603021 949 ntBASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 AC090616.6-203ENST00000579186 1945 ntBASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 FER1L4-210ENST00000615531 5998 ntBASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCUBE3Q8IX30 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms