Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 FAM220BP-201ENST00000377689 816 ntBASIC16.15■□□□□ 0.18
CASC4Q6P4E1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 ADH5P3-201ENST00000433842 1137 ntBASIC16.15■□□□□ 0.18
CASC4Q6P4E1 AL136982.4-201ENST00000437689 1740 ntBASIC16.15■□□□□ 0.18
CASC4Q6P4E1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 POLD2P1-201ENST00000511220 997 ntBASIC16.15■□□□□ 0.18
CASC4Q6P4E1 KRT18P58-201ENST00000527480 1120 ntBASIC16.15■□□□□ 0.18
CASC4Q6P4E1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.15■□□□□ 0.18
CASC4Q6P4E1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CASC4Q6P4E1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CASC4Q6P4E1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.14■□□□□ 0.18
CASC4Q6P4E1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.14■□□□□ 0.17
CASC4Q6P4E1 MCCD1P2-201ENST00000423228 335 ntBASIC16.14■□□□□ 0.17
CASC4Q6P4E1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 AL109954.1-202ENST00000564051 2148 ntBASIC16.14■□□□□ 0.17
CASC4Q6P4E1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 C20orf181-201ENST00000623918 480 ntBASIC16.14■□□□□ 0.17
CASC4Q6P4E1 LINC02228-204ENST00000642115 2962 ntBASIC16.14■□□□□ 0.17
CASC4Q6P4E1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.14■□□□□ 0.17
CASC4Q6P4E1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.14■□□□□ 0.17
CASC4Q6P4E1 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms