Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DENND1BQ6P3S1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DENND1BQ6P3S1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 AC114501.2-201ENST00000439631 535 ntBASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 UGT1A2P-201ENST00000454886 866 ntBASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DENND1BQ6P3S1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 FAM8A3P-201ENST00000427218 844 ntBASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 AL589987.1-201ENST00000453380 819 ntBASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 AC004790.1-201ENST00000612686 536 ntBASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.65■□□□□ 0.26
DENND1BQ6P3S1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms