Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 PTP4A1P2-201ENST00000546033 454 ntBASIC16.65■□□□□ 0.26
VARS2Q5ST30 CLUHP6-201ENST00000580789 941 ntBASIC16.65■□□□□ 0.26
VARS2Q5ST30 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 AC046158.3-201ENST00000624947 2558 ntBASIC16.65■□□□□ 0.26
VARS2Q5ST30 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VARS2Q5ST30 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.26
VARS2Q5ST30 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.64■□□□□ 0.26
VARS2Q5ST30 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 DRD5P1-201ENST00000456605 1438 ntBASIC16.64■□□□□ 0.25
VARS2Q5ST30 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 ANKRD19P-201ENST00000338192 862 ntBASIC16.64■□□□□ 0.25
VARS2Q5ST30 FAM86MP-201ENST00000340703 885 ntBASIC16.64■□□□□ 0.25
VARS2Q5ST30 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 AC026410.3-201ENST00000514280 936 ntBASIC16.64■□□□□ 0.25
VARS2Q5ST30 AC068587.3-201ENST00000526613 355 ntBASIC16.64■□□□□ 0.25
VARS2Q5ST30 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 AP005482.1-201ENST00000563722 1273 ntBASIC16.64■□□□□ 0.25
VARS2Q5ST30 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 AC015910.1-201ENST00000579400 975 ntBASIC16.64■□□□□ 0.25
VARS2Q5ST30 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 AL022328.1-201ENST00000610050 478 ntBASIC16.64■□□□□ 0.25
VARS2Q5ST30 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 AC005252.2-201ENST00000624630 1141 ntBASIC16.64■□□□□ 0.25
VARS2Q5ST30 COX11-210ENST00000639671 696 ntBASIC16.64■□□□□ 0.25
VARS2Q5ST30 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.64■□□□□ 0.25
VARS2Q5ST30 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARS2Q5ST30 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 BCRP2-202ENST00000447763 634 ntBASIC16.63■□□□□ 0.25
VARS2Q5ST30 KRT223P-202ENST00000449164 1292 ntBASIC16.63■□□□□ 0.25
VARS2Q5ST30 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 BCRP6-201ENST00000510112 632 ntBASIC16.63■□□□□ 0.25
VARS2Q5ST30 BCRP7-201ENST00000511549 544 ntBASIC16.63■□□□□ 0.25
VARS2Q5ST30 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 AC104989.1-201ENST00000519711 778 ntBASIC16.63■□□□□ 0.25
VARS2Q5ST30 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms