Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC027796.2-201ENST00000575326 344 ntBASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 AC004461.2-201ENST00000629517 803 ntBASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 AC004840.1-201ENST00000636359 365 ntBASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN20Q4JDL3 AC022144.1-201ENST00000602255 1580 ntBASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 AC138035.3-201ENST00000622706 2791 ntBASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms