Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RFX4Q33E94 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RFX4Q33E94 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.72□□□□□ -0.05
RFX4Q33E94 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.72□□□□□ -0.05
RFX4Q33E94 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.72□□□□□ -0.05
RFX4Q33E94 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.72□□□□□ -0.05
RFX4Q33E94 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.72□□□□□ -0.05
RFX4Q33E94 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RFX4Q33E94 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.72□□□□□ -0.05
RFX4Q33E94 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.72□□□□□ -0.05
RFX4Q33E94 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.72□□□□□ -0.05
RFX4Q33E94 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.72□□□□□ -0.05
RFX4Q33E94 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.72□□□□□ -0.05
RFX4Q33E94 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.72□□□□□ -0.05
RFX4Q33E94 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.72□□□□□ -0.05
RFX4Q33E94 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RFX4Q33E94 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.72□□□□□ -0.05
RFX4Q33E94 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.72□□□□□ -0.05
RFX4Q33E94 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RFX4Q33E94 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RFX4Q33E94 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.72□□□□□ -0.05
RFX4Q33E94 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFX4Q33E94 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.72□□□□□ -0.05
RFX4Q33E94 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RFX4Q33E94 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RFX4Q33E94 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.71□□□□□ -0.05
RFX4Q33E94 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RFX4Q33E94 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.71□□□□□ -0.05
RFX4Q33E94 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RFX4Q33E94 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RFX4Q33E94 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.71□□□□□ -0.05
RFX4Q33E94 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.71□□□□□ -0.05
RFX4Q33E94 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 AC134407.2-201ENST00000625089 1978 ntBASIC14.71□□□□□ -0.05
RFX4Q33E94 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
RFX4Q33E94 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.71□□□□□ -0.05
RFX4Q33E94 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.71□□□□□ -0.05
RFX4Q33E94 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 ZBED1P1-201ENST00000502364 1930 ntBASIC14.71□□□□□ -0.05
RFX4Q33E94 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RFX4Q33E94 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFX4Q33E94 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RFX4Q33E94 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.71□□□□□ -0.05
RFX4Q33E94 CRYGEP-201ENST00000412192 528 ntBASIC14.71□□□□□ -0.05
RFX4Q33E94 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.71□□□□□ -0.05
RFX4Q33E94 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RFX4Q33E94 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.71□□□□□ -0.05
RFX4Q33E94 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.71□□□□□ -0.05
RFX4Q33E94 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.71□□□□□ -0.05
RFX4Q33E94 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
RFX4Q33E94 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.71□□□□□ -0.05
RFX4Q33E94 AC109635.5-201ENST00000533593 962 ntBASIC14.71□□□□□ -0.05
RFX4Q33E94 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.71□□□□□ -0.05
RFX4Q33E94 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.71□□□□□ -0.05
RFX4Q33E94 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.71□□□□□ -0.05
RFX4Q33E94 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.71□□□□□ -0.05
RFX4Q33E94 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RFX4Q33E94 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms