| FOXC1 | Q12948 | MIEF2-204 | ENST00000395706 | 2441 nt | TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | COX6B2-201 | ENST00000326529 | 1663 nt | APPRIS P1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | LEMD2-201 | ENST00000293760 | 2958 nt | APPRIS P1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | HNF4A-202 | ENST00000316673 | 1470 nt | TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | SLC30A1-201 | ENST00000367001 | 5474 nt | APPRIS P1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | MFSD4A-207 | ENST00000536357 | 1841 nt | TSL 2 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | MON1B-203 | ENST00000545553 | 1814 nt | TSL 2 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | DGKE-204 | ENST00000572810 | 1843 nt | TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | TBXA2R-204 | ENST00000589966 | 1814 nt | TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | ARF5-201 | ENST00000000233 | 1103 nt | APPRIS P1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | SRP14-201 | ENST00000267884 | 1077 nt | APPRIS P1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | C1orf53-201 | ENST00000367393 | 588 nt | APPRIS P1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AL133267.1-201 | ENST00000398220 | 340 nt | BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | LINC01237-201 | ENST00000415434 | 573 nt | TSL 4 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | VEGFB-202 | ENST00000426086 | 979 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | LINC01431-201 | ENST00000442440 | 514 nt | TSL 3 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC079112.1-201 | ENST00000454972 | 939 nt | BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | XXYLT1-AS1-201 | ENST00000458531 | 431 nt | TSL 3 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC093627.5-203 | ENST00000497320 | 746 nt | TSL 2 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | CTBP2P4-201 | ENST00000513884 | 920 nt | BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC084024.3-201 | ENST00000520598 | 562 nt | TSL 4 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AP000808.2-201 | ENST00000542410 | 569 nt | TSL 4 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | SEC23A-204 | ENST00000548032 | 907 nt | TSL 2 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC011498.6-201 | ENST00000592034 | 510 nt | TSL 5 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | UBL5-208 | ENST00000593087 | 320 nt | TSL 3 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | CLEC11A-202 | ENST00000599973 | 1026 nt | TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | TLDC2-203 | ENST00000602922 | 1179 nt | APPRIS P1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC092171.5-201 | ENST00000608012 | 942 nt | BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | HDDC2-204 | ENST00000608295 | 879 nt | TSL 5 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | ZACNP1-201 | ENST00000612259 | 710 nt | BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC022748.3-201 | ENST00000621828 | 275 nt | BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | BEGAIN-202 | ENST00000443071 | 2744 nt | TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | TFEB-203 | ENST00000358871 | 2188 nt | TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | SRRM3-204 | ENST00000611745 | 3612 nt | APPRIS P1 TSL 5 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | TK1-201 | ENST00000301634 | 1628 nt | APPRIS P1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | PGAP3-203 | ENST00000378011 | 2533 nt | TSL 2 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | SEPT5-204 | ENST00000406395 | 1974 nt | TSL 5 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | SYT3-206 | ENST00000600079 | 2463 nt | APPRIS P1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | ALAS2-203 | ENST00000396198 | 1936 nt | TSL 5 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | GPER1-206 | ENST00000617001 | 1900 nt | TSL 5 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | MVK-214 | ENST00000629016 | 1591 nt | TSL 5 BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | VGLL2-202 | ENST00000352536 | 1709 nt | TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | ASTN2-205 | ENST00000361209 | 4622 nt | APPRIS P2 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | SATB1-201 | ENST00000338745 | 7810 nt | APPRIS P1 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | CACNA1H-206 | ENST00000565831 | 7815 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.72 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | TUBA3D-201 | ENST00000321253 | 1546 nt | APPRIS P1 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AL592424.1-201 | ENST00000563624 | 1536 nt | BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | PRSS23-201 | ENST00000280258 | 4015 nt | APPRIS P1 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | PHF23-202 | ENST00000454255 | 1662 nt | TSL 2 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | GNE-204 | ENST00000539208 | 2190 nt | TSL 2 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | CHTF18-202 | ENST00000317063 | 2988 nt | APPRIS ALT2 TSL 5 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | MAFF-201 | ENST00000338483 | 2490 nt | APPRIS P1 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC134407.2-201 | ENST00000625089 | 1978 nt | BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | SGSH-201 | ENST00000326317 | 2784 nt | APPRIS P1 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | PITPNM1-201 | ENST00000356404 | 4225 nt | APPRIS P3 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | ANKRD6-201 | ENST00000339746 | 3073 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | DUSP13-210 | ENST00000491677 | 1770 nt | APPRIS P3 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | ELMSAN1-202 | ENST00000394071 | 7721 nt | APPRIS P2 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | CACNA1G-201 | ENST00000352832 | 7848 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | RAB36-202 | ENST00000341989 | 936 nt | TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | CD8B-204 | ENST00000393759 | 1096 nt | TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC010967.1-201 | ENST00000421575 | 489 nt | TSL 5 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | RPL18P13-201 | ENST00000478088 | 569 nt | BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | KRBOX4-206 | ENST00000478600 | 730 nt | APPRIS ALT2 TSL 2 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | GAPDHP40-201 | ENST00000505218 | 1006 nt | BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC100850.1-201 | ENST00000506768 | 649 nt | BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | ALG1L13P-204 | ENST00000523017 | 765 nt | TSL 5 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | NEU3-205 | ENST00000531619 | 582 nt | TSL 5 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | GSKIP-207 | ENST00000556095 | 3834 nt | APPRIS P1 TSL 2 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC141586.1-203 | ENST00000567242 | 366 nt | BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | RN7SL163P-201 | ENST00000583100 | 276 nt | BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | ZNF586-204 | ENST00000598183 | 603 nt | TSL 5 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | HIST1H4A-201 | ENST00000617569 | 312 nt | APPRIS P1 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AL139130.1-201 | ENST00000451362 | 5586 nt | TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | THEM4-201 | ENST00000368814 | 2377 nt | APPRIS P1 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | PAPOLB-201 | ENST00000404991 | 4262 nt | APPRIS P1 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | AC008969.1-201 | ENST00000550135 | 6438 nt | TSL 2 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | UNC5D-204 | ENST00000420357 | 2966 nt | TSL 5 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | TXNRD2-218 | ENST00000542719 | 2024 nt | TSL 1 (best) BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | ADAMTS10-205 | ENST00000595838 | 2458 nt | TSL 2 BASIC | 14.71 | □□□□□ -0.05 | | |
| FOXC1 | Q12948 | SMARCD1-201 | ENST00000381513 | 3237 nt | TSL 1 (best) BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | CFAP36-201 | ENST00000339012 | 1373 nt | TSL 1 (best) BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | MYH14-210 | ENST00000601313 | 6896 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | LMNA-203 | ENST00000368297 | 1679 nt | TSL 2 BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | ATP6V0E2-207 | ENST00000479613 | 1666 nt | TSL 2 BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | IGHM-202 | ENST00000637539 | 1683 nt | APPRIS P5 BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | FAM46A-201 | ENST00000320172 | 5609 nt | APPRIS P2 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | CTCFL-215 | ENST00000608158 | 1984 nt | TSL 1 (best) BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | AEBP2-201 | ENST00000266508 | 3620 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | MXD1-201 | ENST00000264444 | 5587 nt | APPRIS P1 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | RB1CC1-202 | ENST00000435644 | 6614 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.71 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | NPBWR1-201 | ENST00000331251 | 2687 nt | APPRIS P1 BASIC | 14.7 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | CLDN5-202 | ENST00000406028 | 2548 nt | TSL 2 BASIC | 14.7 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | AC148477.4-201 | ENST00000613430 | 1793 nt | BASIC | 14.7 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | CASKIN2-201 | ENST00000321617 | 5015 nt | APPRIS P1 TSL 1 (best) BASIC | 14.7 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | C1orf43-201 | ENST00000350592 | 1610 nt | TSL 1 (best) BASIC | 14.7 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | ARV1-201 | ENST00000310256 | 1335 nt | APPRIS P1 TSL 1 (best) BASIC | 14.7 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | CNR1-201 | ENST00000362094 | 1252 nt | TSL 1 (best) BASIC | 14.7 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | CDC14B-203 | ENST00000375242 | 2965 nt | TSL 2 BASIC | 14.7 | □□□□□ -0.06 | | |
| FOXC1 | Q12948 | GEMIN7-202 | ENST00000391951 | 716 nt | APPRIS P1 TSL 2 BASIC | 14.7 | □□□□□ -0.06 | | |