Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 TSEN15P1-201ENST00000423257 515 ntBASIC15.22■□□□□ 0.03
PCDH1Q08174 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDH1Q08174 SERBP1P3-201ENST00000459980 809 ntBASIC15.22■□□□□ 0.03
PCDH1Q08174 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDH1Q08174 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH1Q08174 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
PCDH1Q08174 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
PCDH1Q08174 AC051619.7-201ENST00000568314 623 ntBASIC15.22■□□□□ 0.03
PCDH1Q08174 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH1Q08174 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
PCDH1Q08174 AL589739.1-201ENST00000607720 493 ntBASIC15.22■□□□□ 0.03
PCDH1Q08174 AL033527.5-202ENST00000641632 1098 ntBASIC15.22■□□□□ 0.03
PCDH1Q08174 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
PCDH1Q08174 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH1Q08174 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 FO538757.1-201ENST00000623083 1397 ntBASIC15.22■□□□□ 0.03
PCDH1Q08174 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDH1Q08174 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDH1Q08174 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH1Q08174 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 AC007326.2-201ENST00000624224 7579 ntBASIC15.21■□□□□ 0.03
PCDH1Q08174 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDH1Q08174 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 MTND6P24-201ENST00000440466 518 ntBASIC15.21■□□□□ 0.03
PCDH1Q08174 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 CNN2P2-201ENST00000443536 909 ntBASIC15.21■□□□□ 0.03
PCDH1Q08174 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDH1Q08174 CNN2P3-201ENST00000450201 906 ntBASIC15.21■□□□□ 0.03
PCDH1Q08174 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.21■□□□□ 0.03
PCDH1Q08174 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH1Q08174 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH1Q08174 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDH1Q08174 ZNF890P-202ENST00000530367 1156 ntBASIC15.21■□□□□ 0.03
PCDH1Q08174 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDH1Q08174 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH1Q08174 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PCDH1Q08174 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDH1Q08174 AL596442.2-201ENST00000610240 980 ntBASIC15.21■□□□□ 0.03
PCDH1Q08174 AL136317.3-201ENST00000618497 906 ntBASIC15.21■□□□□ 0.03
PCDH1Q08174 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH1Q08174 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH1Q08174 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
PCDH1Q08174 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH1Q08174 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH1Q08174 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH1Q08174 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDH1Q08174 AC006486.2-201ENST00000624246 2199 ntBASIC15.21■□□□□ 0.02
PCDH1Q08174 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH1Q08174 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH1Q08174 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH1Q08174 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.21■□□□□ 0.02
PCDH1Q08174 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH1Q08174 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH1Q08174 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH1Q08174 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH1Q08174 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PCDH1Q08174 AL109954.1-202ENST00000564051 2148 ntBASIC15.2■□□□□ 0.02
PCDH1Q08174 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms