Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDR2Q01850 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.83■□□□□ 0.28
CDR2Q01850 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDR2Q01850 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDR2Q01850 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.83■□□□□ 0.28
CDR2Q01850 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.83■□□□□ 0.28
CDR2Q01850 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDR2Q01850 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.83■□□□□ 0.28
CDR2Q01850 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.83■□□□□ 0.28
CDR2Q01850 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.83■□□□□ 0.28
CDR2Q01850 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDR2Q01850 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.83■□□□□ 0.28
CDR2Q01850 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.83■□□□□ 0.28
CDR2Q01850 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDR2Q01850 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDR2Q01850 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDR2Q01850 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDR2Q01850 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.82■□□□□ 0.28
CDR2Q01850 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CDR2Q01850 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.82■□□□□ 0.28
CDR2Q01850 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.82■□□□□ 0.28
CDR2Q01850 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.82■□□□□ 0.28
CDR2Q01850 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.82■□□□□ 0.28
CDR2Q01850 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDR2Q01850 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.82■□□□□ 0.28
CDR2Q01850 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.82■□□□□ 0.28
CDR2Q01850 AC109322.1-201ENST00000524499 1264 ntBASIC16.82■□□□□ 0.28
CDR2Q01850 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.82■□□□□ 0.28
CDR2Q01850 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CDR2Q01850 AL589739.1-201ENST00000607720 493 ntBASIC16.82■□□□□ 0.28
CDR2Q01850 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.82■□□□□ 0.28
CDR2Q01850 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 AC068587.6-202ENST00000641839 5619 ntBASIC16.82■□□□□ 0.28
CDR2Q01850 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
CDR2Q01850 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.82■□□□□ 0.28
CDR2Q01850 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDR2Q01850 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.81■□□□□ 0.28
CDR2Q01850 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.81■□□□□ 0.28
CDR2Q01850 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.81■□□□□ 0.28
CDR2Q01850 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.81■□□□□ 0.28
CDR2Q01850 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 CETN4P-206ENST00000642099 2168 ntBASIC16.81■□□□□ 0.28
CDR2Q01850 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.81■□□□□ 0.28
CDR2Q01850 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 AL080243.2-201ENST00000418783 582 ntBASIC16.81■□□□□ 0.28
CDR2Q01850 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.81■□□□□ 0.28
CDR2Q01850 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CDR2Q01850 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.81■□□□□ 0.28
CDR2Q01850 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.81■□□□□ 0.28
CDR2Q01850 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.81■□□□□ 0.28
CDR2Q01850 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.81■□□□□ 0.28
CDR2Q01850 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDR2Q01850 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDR2Q01850 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms