Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H2BDP58876 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H2BDP58876 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H2BDP58876 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H2BDP58876 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H2BDP58876 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H2BDP58876 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H2BDP58876 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H2BDP58876 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
HIST1H2BDP58876 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H2BDP58876 U82695.1-201ENST00000635752 1889 ntBASIC11.87□□□□□ -0.51
HIST1H2BDP58876 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 WASH6P-202ENST00000359512 1437 ntBASIC11.86□□□□□ -0.51
HIST1H2BDP58876 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 AC003669.1-201ENST00000334569 611 ntBASIC11.86□□□□□ -0.51
HIST1H2BDP58876 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 AL157888.1-201ENST00000631930 593 ntBASIC11.86□□□□□ -0.51
HIST1H2BDP58876 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 KRT8P24-201ENST00000560290 1559 ntBASIC11.86□□□□□ -0.51
HIST1H2BDP58876 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H2BDP58876 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 ESRRAP1-201ENST00000400596 1257 ntBASIC11.85□□□□□ -0.51
HIST1H2BDP58876 AL355802.2-201ENST00000402069 882 ntBASIC11.85□□□□□ -0.51
HIST1H2BDP58876 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 ACTG1P4-201ENST00000425123 1122 ntBASIC11.85□□□□□ -0.51
HIST1H2BDP58876 PPP1R14BP2-201ENST00000426284 444 ntBASIC11.85□□□□□ -0.51
HIST1H2BDP58876 AL353807.1-201ENST00000427475 662 ntBASIC11.85□□□□□ -0.51
HIST1H2BDP58876 NALT1-201ENST00000429224 738 ntTSL 5 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 AC097488.1-201ENST00000507834 756 ntBASIC11.85□□□□□ -0.51
HIST1H2BDP58876 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC11.85□□□□□ -0.51
HIST1H2BDP58876 AL023803.3-201ENST00000615559 522 ntBASIC11.85□□□□□ -0.51
HIST1H2BDP58876 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms