Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.06□□□□□ -0.16
GFRA1P56159 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.06□□□□□ -0.16
GFRA1P56159 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.06□□□□□ -0.16
GFRA1P56159 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.06□□□□□ -0.16
GFRA1P56159 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GFRA1P56159 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
GFRA1P56159 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.06□□□□□ -0.16
GFRA1P56159 AC134915.1-201ENST00000426461 574 ntBASIC14.06□□□□□ -0.16
GFRA1P56159 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.06□□□□□ -0.16
GFRA1P56159 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.06□□□□□ -0.16
GFRA1P56159 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.06□□□□□ -0.16
GFRA1P56159 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.06□□□□□ -0.16
GFRA1P56159 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.06□□□□□ -0.16
GFRA1P56159 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 AL359711.2-201ENST00000563105 872 ntBASIC14.06□□□□□ -0.16
GFRA1P56159 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.06□□□□□ -0.16
GFRA1P56159 AC124283.3-201ENST00000570869 594 ntBASIC14.06□□□□□ -0.16
GFRA1P56159 AC132938.2-201ENST00000579188 680 ntBASIC14.06□□□□□ -0.16
GFRA1P56159 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.06□□□□□ -0.16
GFRA1P56159 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 AC133539.2-201ENST00000604757 467 ntBASIC14.06□□□□□ -0.16
GFRA1P56159 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.06□□□□□ -0.16
GFRA1P56159 AL591163.1-201ENST00000641757 987 ntBASIC14.06□□□□□ -0.16
GFRA1P56159 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
GFRA1P56159 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.06□□□□□ -0.16
GFRA1P56159 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GFRA1P56159 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 AC127383.1-201ENST00000444697 1800 ntBASIC14.06□□□□□ -0.16
GFRA1P56159 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.06□□□□□ -0.16
GFRA1P56159 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
GFRA1P56159 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GFRA1P56159 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.05□□□□□ -0.16
GFRA1P56159 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GFRA1P56159 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.05□□□□□ -0.16
GFRA1P56159 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 VDAC1P7-201ENST00000462417 847 ntBASIC14.05□□□□□ -0.16
GFRA1P56159 GIMAP3P-201ENST00000495150 836 ntBASIC14.05□□□□□ -0.16
GFRA1P56159 AC026410.3-201ENST00000514280 936 ntBASIC14.05□□□□□ -0.16
GFRA1P56159 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.05□□□□□ -0.16
GFRA1P56159 AC120045.2-201ENST00000567334 178 ntBASIC14.05□□□□□ -0.16
GFRA1P56159 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.05□□□□□ -0.16
GFRA1P56159 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.05□□□□□ -0.16
GFRA1P56159 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GFRA1P56159 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GFRA1P56159 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
GFRA1P56159 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GFRA1P56159 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.05□□□□□ -0.16
GFRA1P56159 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GFRA1P56159 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms