Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.26□□□□□ -0.13
APOBEC1P41238 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.26□□□□□ -0.13
APOBEC1P41238 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.26□□□□□ -0.13
APOBEC1P41238 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.26□□□□□ -0.13
APOBEC1P41238 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
APOBEC1P41238 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.26□□□□□ -0.13
APOBEC1P41238 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.26□□□□□ -0.13
APOBEC1P41238 TSSK5P-201ENST00000423978 907 ntBASIC14.26□□□□□ -0.13
APOBEC1P41238 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.26□□□□□ -0.13
APOBEC1P41238 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.26□□□□□ -0.13
APOBEC1P41238 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.26□□□□□ -0.13
APOBEC1P41238 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.26□□□□□ -0.13
APOBEC1P41238 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
APOBEC1P41238 AL109936.8-201ENST00000641772 604 ntBASIC14.26□□□□□ -0.13
APOBEC1P41238 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.26□□□□□ -0.13
APOBEC1P41238 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOBEC1P41238 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.26□□□□□ -0.13
APOBEC1P41238 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 TMBIM7P-203ENST00000641617 1718 ntBASIC14.26□□□□□ -0.13
APOBEC1P41238 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
APOBEC1P41238 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
APOBEC1P41238 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.25□□□□□ -0.13
APOBEC1P41238 AC090616.6-203ENST00000579186 1945 ntBASIC14.25□□□□□ -0.13
APOBEC1P41238 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.25□□□□□ -0.13
APOBEC1P41238 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.25□□□□□ -0.13
APOBEC1P41238 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
APOBEC1P41238 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.25□□□□□ -0.13
APOBEC1P41238 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.25□□□□□ -0.13
APOBEC1P41238 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
APOBEC1P41238 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.25□□□□□ -0.13
APOBEC1P41238 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.25□□□□□ -0.13
APOBEC1P41238 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.25□□□□□ -0.13
APOBEC1P41238 AC009477.1-201ENST00000452936 217 ntBASIC14.25□□□□□ -0.13
APOBEC1P41238 CYMP-203ENST00000474680 1263 ntBASIC14.25□□□□□ -0.13
APOBEC1P41238 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.25□□□□□ -0.13
APOBEC1P41238 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.25□□□□□ -0.13
APOBEC1P41238 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.25□□□□□ -0.13
APOBEC1P41238 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.25□□□□□ -0.13
APOBEC1P41238 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.25□□□□□ -0.13
APOBEC1P41238 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.25□□□□□ -0.13
APOBEC1P41238 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.25□□□□□ -0.13
APOBEC1P41238 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
APOBEC1P41238 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.25□□□□□ -0.13
APOBEC1P41238 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.25□□□□□ -0.13
APOBEC1P41238 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
APOBEC1P41238 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 NORAD-201ENST00000565493 5339 ntBASIC14.25□□□□□ -0.13
APOBEC1P41238 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
APOBEC1P41238 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.25□□□□□ -0.13
APOBEC1P41238 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
APOBEC1P41238 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.25□□□□□ -0.13
APOBEC1P41238 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC1P41238 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC1P41238 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
APOBEC1P41238 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC1P41238 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms