Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CCL3L1P16619 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CCL3L1P16619 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CCL3L1P16619 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.02□□□□□ -0.32
CCL3L1P16619 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL3L1P16619 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CCL3L1P16619 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.02□□□□□ -0.32
CCL3L1P16619 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
CCL3L1P16619 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.02□□□□□ -0.32
CCL3L1P16619 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL3L1P16619 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.02□□□□□ -0.32
CCL3L1P16619 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CCL3L1P16619 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CCL3L1P16619 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CCL3L1P16619 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
CCL3L1P16619 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL3L1P16619 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.02□□□□□ -0.32
CCL3L1P16619 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CCL3L1P16619 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CCL3L1P16619 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CCL3L1P16619 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL3L1P16619 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.02□□□□□ -0.33
CCL3L1P16619 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.02□□□□□ -0.33
CCL3L1P16619 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.02□□□□□ -0.33
CCL3L1P16619 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL3L1P16619 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL3L1P16619 SDHAP3-202ENST00000515467 728 ntBASIC13.02□□□□□ -0.33
CCL3L1P16619 RNA5SP421-201ENST00000516864 134 ntBASIC13.02□□□□□ -0.33
CCL3L1P16619 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.02□□□□□ -0.33
CCL3L1P16619 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL3L1P16619 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.02□□□□□ -0.33
CCL3L1P16619 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.02□□□□□ -0.33
CCL3L1P16619 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CCL3L1P16619 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 LINC01115-203ENST00000606068 577 ntBASIC13.02□□□□□ -0.33
CCL3L1P16619 AC074044.1-201ENST00000609673 707 ntBASIC13.02□□□□□ -0.33
CCL3L1P16619 AC008738.7-201ENST00000609744 511 ntBASIC13.02□□□□□ -0.33
CCL3L1P16619 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CCL3L1P16619 Z97205.2-201ENST00000564697 1639 ntBASIC13.02□□□□□ -0.33
CCL3L1P16619 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL3L1P16619 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL3L1P16619 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL3L1P16619 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CCL3L1P16619 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL3L1P16619 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL3L1P16619 AC009090.5-201ENST00000624886 2285 ntBASIC13.01□□□□□ -0.33
CCL3L1P16619 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCL3L1P16619 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL3L1P16619 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CCL3L1P16619 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 MRPS18AP1-201ENST00000414458 589 ntBASIC13.01□□□□□ -0.33
CCL3L1P16619 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL3L1P16619 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.01□□□□□ -0.33
CCL3L1P16619 UGT1A2P-201ENST00000454886 866 ntBASIC13.01□□□□□ -0.33
CCL3L1P16619 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL3L1P16619 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CCL3L1P16619 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 AF228730.6-201ENST00000641497 218 ntBASIC13.01□□□□□ -0.33
CCL3L1P16619 AC084121.3-201ENST00000641716 218 ntBASIC13.01□□□□□ -0.33
CCL3L1P16619 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.01□□□□□ -0.33
CCL3L1P16619 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL3L1P16619 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms