Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 AL353705.2-201ENST00000428243 662 ntBASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 AC005237.2-201ENST00000434368 219 ntBASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 ALG1L5P-201ENST00000482043 771 ntBASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HNRNPCL4P0DMR1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 AC009090.5-201ENST00000624886 2285 ntBASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 SBF1P1-201ENST00000444527 5631 ntBASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 DNAJB3-201ENST00000446806 729 ntBASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 ALG1L8P-201ENST00000533887 760 ntBASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 AC022145.2-201ENST00000598203 171 ntBASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 AC097359.3-201ENST00000603982 1210 ntBASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HNRNPCL4P0DMR1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.68□□□□□ -0.06
HNRNPCL4P0DMR1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms