Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 MIR3908-201ENST00000579798 126 ntBASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 AL033527.5-202ENST00000641632 1098 ntBASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 DBET-201ENST00000630918 3363 ntBASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 U82695.1-201ENST00000635752 1889 ntBASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 SPDYE19P-201ENST00000338590 713 ntBASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 COX5BP8-201ENST00000416911 349 ntBASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 HMGB3P14-201ENST00000494195 599 ntBASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 AC093004.1-201ENST00000508850 424 ntBASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 AL365330.1-201ENST00000607459 531 ntBASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 LINC01144-201ENST00000626198 1710 ntBASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL3P0C7X3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 SPDYE17-201ENST00000412399 783 ntBASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.3■□□□□ 0.04
CCNYL3P0C7X3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms