Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLR3DP05423 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR3DP05423 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
POLR3DP05423 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
POLR3DP05423 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
POLR3DP05423 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
POLR3DP05423 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
POLR3DP05423 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR3DP05423 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR3DP05423 INE1-201ENST00000456273 945 ntBASIC18.84■□□□□ 0.61
POLR3DP05423 AC104596.2-201ENST00000512793 793 ntBASIC18.84■□□□□ 0.61
POLR3DP05423 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR3DP05423 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.84■□□□□ 0.61
POLR3DP05423 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR3DP05423 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR3DP05423 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR3DP05423 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.84■□□□□ 0.61
POLR3DP05423 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.84■□□□□ 0.61
POLR3DP05423 MIR8072-201ENST00000614241 80 ntBASIC18.84■□□□□ 0.61
POLR3DP05423 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.84■□□□□ 0.61
POLR3DP05423 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 AC018892.3-201ENST00000623986 2499 ntBASIC18.84■□□□□ 0.61
POLR3DP05423 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
POLR3DP05423 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
POLR3DP05423 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
POLR3DP05423 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 CLK3P2-201ENST00000427566 1453 ntBASIC18.84■□□□□ 0.61
POLR3DP05423 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR3DP05423 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
POLR3DP05423 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR3DP05423 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.61
POLR3DP05423 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR3DP05423 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR3DP05423 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR3DP05423 CDC14C-201ENST00000428251 1719 ntBASIC18.83■□□□□ 0.61
POLR3DP05423 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
POLR3DP05423 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR3DP05423 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR3DP05423 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
POLR3DP05423 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR3DP05423 KRT18P64-201ENST00000434946 1219 ntBASIC18.83■□□□□ 0.6
POLR3DP05423 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR3DP05423 AC011495.1-201ENST00000498085 584 ntBASIC18.83■□□□□ 0.6
POLR3DP05423 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR3DP05423 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
POLR3DP05423 HNRNPUP1-201ENST00000554987 333 ntBASIC18.83■□□□□ 0.6
POLR3DP05423 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.83■□□□□ 0.6
POLR3DP05423 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.83■□□□□ 0.6
POLR3DP05423 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR3DP05423 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR3DP05423 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
POLR3DP05423 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR3DP05423 LINC02447-202ENST00000501888 2146 ntBASIC18.83■□□□□ 0.6
POLR3DP05423 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
POLR3DP05423 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR3DP05423 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR3DP05423 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
POLR3DP05423 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
POLR3DP05423 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR3DP05423 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR3DP05423 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.82■□□□□ 0.6
POLR3DP05423 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
POLR3DP05423 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR3DP05423 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR3DP05423 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR3DP05423 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
POLR3DP05423 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
POLR3DP05423 RN7SL399P-201ENST00000471648 279 ntBASIC18.82■□□□□ 0.6
POLR3DP05423 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR3DP05423 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR3DP05423 AL158212.4-201ENST00000624062 1286 ntBASIC18.82■□□□□ 0.6
POLR3DP05423 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 AC105917.1-201ENST00000506637 2539 ntBASIC18.82■□□□□ 0.6
POLR3DP05423 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR3DP05423 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR3DP05423 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms