Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFAP04085 CICP13-201ENST00000422015 2789 ntBASIC14.83□□□□□ -0.04
PDGFAP04085 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFAP04085 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 AL031731.1-201ENST00000642131 2094 ntBASIC14.82□□□□□ -0.04
PDGFAP04085 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.82□□□□□ -0.04
PDGFAP04085 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
PDGFAP04085 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.82□□□□□ -0.04
PDGFAP04085 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.82□□□□□ -0.04
PDGFAP04085 AP005482.1-201ENST00000563722 1273 ntBASIC14.82□□□□□ -0.04
PDGFAP04085 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.82□□□□□ -0.04
PDGFAP04085 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
PDGFAP04085 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 TMEM261P1-201ENST00000604899 340 ntBASIC14.82□□□□□ -0.04
PDGFAP04085 AC133552.6-201ENST00000613406 534 ntBASIC14.82□□□□□ -0.04
PDGFAP04085 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 RPSAP52-203ENST00000622976 1023 ntBASIC14.82□□□□□ -0.04
PDGFAP04085 AL033527.5-201ENST00000641382 801 ntBASIC14.82□□□□□ -0.04
PDGFAP04085 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.82□□□□□ -0.04
PDGFAP04085 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
PDGFAP04085 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFAP04085 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFAP04085 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PDGFAP04085 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PDGFAP04085 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PDGFAP04085 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.81□□□□□ -0.04
PDGFAP04085 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 CICP4-201ENST00000447359 2812 ntBASIC14.81□□□□□ -0.04
PDGFAP04085 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PDGFAP04085 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 GPAA1P2-202ENST00000606848 1787 ntBASIC14.81□□□□□ -0.04
PDGFAP04085 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PDGFAP04085 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.81□□□□□ -0.04
PDGFAP04085 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.81□□□□□ -0.04
PDGFAP04085 AC245100.3-201ENST00000441281 285 ntBASIC14.81□□□□□ -0.04
PDGFAP04085 AL139010.1-201ENST00000454878 894 ntBASIC14.81□□□□□ -0.04
PDGFAP04085 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFAP04085 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 MIR4525-201ENST00000580000 75 ntBASIC14.81□□□□□ -0.04
PDGFAP04085 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 AC025048.3-201ENST00000590609 569 ntBASIC14.81□□□□□ -0.04
PDGFAP04085 AC020765.3-201ENST00000613051 740 ntBASIC14.81□□□□□ -0.04
PDGFAP04085 AC005702.4-201ENST00000618393 416 ntBASIC14.81□□□□□ -0.04
PDGFAP04085 AL139011.1-202ENST00000642063 584 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms