Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.06□□□□□ -0.16
PFDN1O60925 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 BX324167.2-201ENST00000623717 3316 ntBASIC14.06□□□□□ -0.16
PFDN1O60925 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.06□□□□□ -0.16
PFDN1O60925 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.06□□□□□ -0.16
PFDN1O60925 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.06□□□□□ -0.16
PFDN1O60925 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.06□□□□□ -0.16
PFDN1O60925 AC105036.2-201ENST00000569468 176 ntBASIC14.06□□□□□ -0.16
PFDN1O60925 AC011298.2-201ENST00000617989 482 ntBASIC14.06□□□□□ -0.16
PFDN1O60925 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.06□□□□□ -0.16
PFDN1O60925 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
PFDN1O60925 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
PFDN1O60925 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC14.06□□□□□ -0.16
PFDN1O60925 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PFDN1O60925 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC14.06□□□□□ -0.16
PFDN1O60925 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PFDN1O60925 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC14.06□□□□□ -0.16
PFDN1O60925 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PFDN1O60925 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.05□□□□□ -0.16
PFDN1O60925 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.05□□□□□ -0.16
PFDN1O60925 AC006277.1-201ENST00000624348 1610 ntBASIC14.05□□□□□ -0.16
PFDN1O60925 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.05□□□□□ -0.16
PFDN1O60925 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PFDN1O60925 LINC01144-201ENST00000626198 1710 ntBASIC14.05□□□□□ -0.16
PFDN1O60925 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.05□□□□□ -0.16
PFDN1O60925 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 AOC4P-203ENST00000566825 2289 ntBASIC14.05□□□□□ -0.16
PFDN1O60925 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PFDN1O60925 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.05□□□□□ -0.16
PFDN1O60925 AC060766.5-201ENST00000590539 871 ntBASIC14.05□□□□□ -0.16
PFDN1O60925 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN1O60925 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.05□□□□□ -0.16
PFDN1O60925 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms