Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.9□□□□□ -0.5
SNAI2O43623 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.9□□□□□ -0.5
SNAI2O43623 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.9□□□□□ -0.5
SNAI2O43623 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 AP000550.4-202ENST00000639755 178 ntBASIC11.9□□□□□ -0.5
SNAI2O43623 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.9□□□□□ -0.5
SNAI2O43623 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SNAI2O43623 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SNAI2O43623 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SNAI2O43623 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
SNAI2O43623 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
SNAI2O43623 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
SNAI2O43623 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SNAI2O43623 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.9□□□□□ -0.51
SNAI2O43623 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.89□□□□□ -0.51
SNAI2O43623 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.89□□□□□ -0.51
SNAI2O43623 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.89□□□□□ -0.51
SNAI2O43623 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.89□□□□□ -0.51
SNAI2O43623 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.89□□□□□ -0.51
SNAI2O43623 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.89□□□□□ -0.51
SNAI2O43623 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.89□□□□□ -0.51
SNAI2O43623 FGFR3P6-201ENST00000457012 610 ntBASIC11.89□□□□□ -0.51
SNAI2O43623 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.89□□□□□ -0.51
SNAI2O43623 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.89□□□□□ -0.51
SNAI2O43623 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.89□□□□□ -0.51
SNAI2O43623 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 MIR3909-201ENST00000579518 119 ntBASIC11.89□□□□□ -0.51
SNAI2O43623 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.89□□□□□ -0.51
SNAI2O43623 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.89□□□□□ -0.51
SNAI2O43623 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.89□□□□□ -0.51
SNAI2O43623 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.89□□□□□ -0.51
SNAI2O43623 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SNAI2O43623 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SNAI2O43623 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC11.89□□□□□ -0.51
SNAI2O43623 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
SNAI2O43623 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.89□□□□□ -0.51
SNAI2O43623 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SNAI2O43623 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
SNAI2O43623 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.88□□□□□ -0.51
SNAI2O43623 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SNAI2O43623 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SNAI2O43623 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.88□□□□□ -0.51
SNAI2O43623 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SNAI2O43623 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
SNAI2O43623 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SNAI2O43623 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.88□□□□□ -0.51
SNAI2O43623 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SNAI2O43623 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms