Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TSPAN4O14817 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TSPAN4O14817 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TSPAN4O14817 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
TSPAN4O14817 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TSPAN4O14817 NSUN5P1-202ENST00000421140 1535 ntBASIC13.39□□□□□ -0.27
TSPAN4O14817 NSUN5P2-203ENST00000457352 1529 ntBASIC13.39□□□□□ -0.27
TSPAN4O14817 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 AC131212.3-201ENST00000624087 4219 ntBASIC13.38□□□□□ -0.27
TSPAN4O14817 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TSPAN4O14817 AC013726.1-201ENST00000563747 2285 ntBASIC13.38□□□□□ -0.27
TSPAN4O14817 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.38□□□□□ -0.27
TSPAN4O14817 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TSPAN4O14817 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TSPAN4O14817 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.38□□□□□ -0.27
TSPAN4O14817 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 CICP11-201ENST00000434745 2827 ntBASIC13.38□□□□□ -0.27
TSPAN4O14817 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TSPAN4O14817 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.38□□□□□ -0.27
TSPAN4O14817 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TSPAN4O14817 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TSPAN4O14817 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.38□□□□□ -0.27
TSPAN4O14817 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TSPAN4O14817 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.38□□□□□ -0.27
TSPAN4O14817 POM121L3P-201ENST00000419331 1163 ntBASIC13.38□□□□□ -0.27
TSPAN4O14817 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 NUS1P1-201ENST00000446295 882 ntBASIC13.38□□□□□ -0.27
TSPAN4O14817 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.38□□□□□ -0.27
TSPAN4O14817 AC091607.1-201ENST00000490318 1060 ntBASIC13.38□□□□□ -0.27
TSPAN4O14817 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.38□□□□□ -0.27
TSPAN4O14817 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.38□□□□□ -0.27
TSPAN4O14817 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.38□□□□□ -0.27
TSPAN4O14817 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TSPAN4O14817 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.38□□□□□ -0.27
TSPAN4O14817 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.38□□□□□ -0.27
TSPAN4O14817 CICP16-201ENST00000502609 2813 ntBASIC13.38□□□□□ -0.27
TSPAN4O14817 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TSPAN4O14817 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TSPAN4O14817 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TSPAN4O14817 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSPAN4O14817 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TSPAN4O14817 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.38□□□□□ -0.27
TSPAN4O14817 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.37□□□□□ -0.27
TSPAN4O14817 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TSPAN4O14817 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TSPAN4O14817 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TSPAN4O14817 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.37□□□□□ -0.27
TSPAN4O14817 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.37□□□□□ -0.27
TSPAN4O14817 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 KRT18P56-201ENST00000507275 550 ntBASIC13.37□□□□□ -0.27
TSPAN4O14817 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.37□□□□□ -0.27
TSPAN4O14817 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.37□□□□□ -0.27
TSPAN4O14817 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.37□□□□□ -0.27
TSPAN4O14817 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.37□□□□□ -0.27
TSPAN4O14817 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TSPAN4O14817 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TSPAN4O14817 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSPAN4O14817 BX276092.7-203ENST00000637198 1536 ntBASIC13.37□□□□□ -0.27
TSPAN4O14817 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms