Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.52■□□□□ 0.24
SOX1O00570 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.52■□□□□ 0.24
SOX1O00570 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.52■□□□□ 0.24
SOX1O00570 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.52■□□□□ 0.24
SOX1O00570 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.52■□□□□ 0.24
SOX1O00570 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SOX1O00570 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX1O00570 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SOX1O00570 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.52■□□□□ 0.24
SOX1O00570 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.52■□□□□ 0.24
SOX1O00570 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX1O00570 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX1O00570 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.52■□□□□ 0.23
SOX1O00570 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SOX1O00570 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SOX1O00570 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SOX1O00570 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SOX1O00570 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SOX1O00570 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SOX1O00570 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SOX1O00570 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.51■□□□□ 0.23
SOX1O00570 AL645728.1-201ENST00000366221 2101 ntBASIC16.51■□□□□ 0.23
SOX1O00570 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SOX1O00570 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.51■□□□□ 0.23
SOX1O00570 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SOX1O00570 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.51■□□□□ 0.23
SOX1O00570 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.51■□□□□ 0.23
SOX1O00570 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SOX1O00570 AC114812.1-204ENST00000449669 728 ntBASIC16.51■□□□□ 0.23
SOX1O00570 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.51■□□□□ 0.23
SOX1O00570 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.51■□□□□ 0.23
SOX1O00570 AC011247.3-201ENST00000603297 438 ntBASIC16.51■□□□□ 0.23
SOX1O00570 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SOX1O00570 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.51■□□□□ 0.23
SOX1O00570 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.51■□□□□ 0.23
SOX1O00570 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX1O00570 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.5■□□□□ 0.23
SOX1O00570 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.5■□□□□ 0.23
SOX1O00570 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.5■□□□□ 0.23
SOX1O00570 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.5■□□□□ 0.23
SOX1O00570 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.5■□□□□ 0.23
SOX1O00570 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.5■□□□□ 0.23
SOX1O00570 RPL8P2-201ENST00000430538 502 ntBASIC16.5■□□□□ 0.23
SOX1O00570 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.5■□□□□ 0.23
SOX1O00570 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.5■□□□□ 0.23
SOX1O00570 RN7SL67P-201ENST00000492147 296 ntBASIC16.5■□□□□ 0.23
SOX1O00570 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.5■□□□□ 0.23
SOX1O00570 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 AC005324.6-201ENST00000587972 613 ntBASIC16.5■□□□□ 0.23
SOX1O00570 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 AC105137.3-201ENST00000617588 984 ntBASIC16.5■□□□□ 0.23
SOX1O00570 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.5■□□□□ 0.23
SOX1O00570 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.5■□□□□ 0.23
SOX1O00570 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.5■□□□□ 0.23
SOX1O00570 NAP1L6-202ENST00000641404 1222 ntBASIC16.5■□□□□ 0.23
SOX1O00570 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.5■□□□□ 0.23
SOX1O00570 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.5■□□□□ 0.23
SOX1O00570 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.5■□□□□ 0.23
SOX1O00570 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms