Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM3A6NNA2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM3A6NNA2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM3A6NNA2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM3A6NNA2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM3A6NNA2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SRRM3A6NNA2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM3A6NNA2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SRRM3A6NNA2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SRRM3A6NNA2 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.42■□□□□ 0.22
SRRM3A6NNA2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 AGAP7P-201ENST00000582299 2062 ntBASIC16.41■□□□□ 0.22
SRRM3A6NNA2 AGAP14-201ENST00000624701 2060 ntBASIC16.41■□□□□ 0.22
SRRM3A6NNA2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 SERBP1P5-201ENST00000510079 1181 ntBASIC16.41■□□□□ 0.22
SRRM3A6NNA2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 GGTLC5P-201ENST00000617623 998 ntBASIC16.41■□□□□ 0.22
SRRM3A6NNA2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 CU639417.3-201ENST00000624240 1404 ntBASIC16.41■□□□□ 0.22
SRRM3A6NNA2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 AP002414.2-201ENST00000591780 3365 ntBASIC16.41■□□□□ 0.22
SRRM3A6NNA2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM3A6NNA2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 RPS2P32-201ENST00000439199 892 ntBASIC16.4■□□□□ 0.22
SRRM3A6NNA2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM3A6NNA2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms