Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRDV1A0A1B0GX56 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.91□□□□□ -0.18
TRDV1A0A1B0GX56 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRDV1A0A1B0GX56 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRDV1A0A1B0GX56 ACE3P-201ENST00000423435 1973 ntBASIC13.91□□□□□ -0.18
TRDV1A0A1B0GX56 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRDV1A0A1B0GX56 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 FOSL1P1-201ENST00000511041 816 ntBASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRDV1A0A1B0GX56 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRDV1A0A1B0GX56 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRDV1A0A1B0GX56 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRDV1A0A1B0GX56 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.9□□□□□ -0.19
TRDV1A0A1B0GX56 SBF1P1-201ENST00000444527 5631 ntBASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 AC027601.5-201ENST00000624065 2482 ntBASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRDV1A0A1B0GX56 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 302.2 ms