Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4B1Q9Y6B7 AL353732.1-201ENST00000569618 1459 ntBASIC15.26■□□□□ 0.03
AP4B1Q9Y6B7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.26■□□□□ 0.03
AP4B1Q9Y6B7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.26■□□□□ 0.03
AP4B1Q9Y6B7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4B1Q9Y6B7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 MIR600HG-201ENST00000449175 5984 ntBASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 AC004832.2-201ENST00000426397 482 ntBASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 AC091167.2-201ENST00000579581 588 ntBASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 AC004877.2-201ENST00000623941 599 ntBASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 AL645728.2-201ENST00000641974 660 ntBASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 AL137784.3-201ENST00000623858 2288 ntBASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 AC015656.1-201ENST00000624209 3578 ntBASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP4B1Q9Y6B7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 BCAR1-209ENST00000546196 1340 ntBASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 AC090616.6-203ENST00000579186 1945 ntBASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 KRT19P2-202ENST00000557173 1012 ntBASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 AGAP7P-201ENST00000582299 2062 ntBASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 AGAP14-201ENST00000624701 2060 ntBASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 MYO15B-237ENST00000642007 4893 ntBASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms