Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 RCN1P1-201ENST00000400413 996 ntBASIC14.98□□□□□ -0.01
AP4S1Q9Y587 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 ELK2BP-201ENST00000415014 1224 ntBASIC14.98□□□□□ -0.01
AP4S1Q9Y587 RBM17P3-201ENST00000417687 1192 ntBASIC14.98□□□□□ -0.01
AP4S1Q9Y587 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 AC012615.1-201ENST00000565797 1299 ntBASIC14.98□□□□□ -0.01
AP4S1Q9Y587 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 AL121956.5-201ENST00000625261 221 ntBASIC14.98□□□□□ -0.01
AP4S1Q9Y587 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.98□□□□□ -0.01
AP4S1Q9Y587 LINC01230-201ENST00000625222 3017 ntBASIC14.98□□□□□ -0.01
AP4S1Q9Y587 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4S1Q9Y587 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 AC005252.3-201ENST00000623855 2258 ntBASIC14.97□□□□□ -0.01
AP4S1Q9Y587 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 PMS2P4-201ENST00000412466 1052 ntBASIC14.97□□□□□ -0.01
AP4S1Q9Y587 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 AL645939.2-201ENST00000427340 991 ntBASIC14.97□□□□□ -0.01
AP4S1Q9Y587 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 KRT16P4-201ENST00000453883 522 ntBASIC14.97□□□□□ -0.01
AP4S1Q9Y587 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 MIR3909-201ENST00000579518 119 ntBASIC14.97□□□□□ -0.01
AP4S1Q9Y587 MIR4313-201ENST00000580760 101 ntBASIC14.97□□□□□ -0.01
AP4S1Q9Y587 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 MTDHP4-201ENST00000600287 670 ntBASIC14.97□□□□□ -0.01
AP4S1Q9Y587 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms