Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAPPC4Q9Y296 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC4Q9Y296 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAPPC4Q9Y296 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAPPC4Q9Y296 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAPPC4Q9Y296 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC4Q9Y296 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAPPC4Q9Y296 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAPPC4Q9Y296 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 SPDYE7P-202ENST00000420373 878 ntBASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 RPS8P6-201ENST00000426177 609 ntBASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 AL353705.2-201ENST00000428243 662 ntBASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 AC026150.2-201ENST00000564693 1156 ntBASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAPPC4Q9Y296 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 AC008677.1-201ENST00000519230 1561 ntBASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC4Q9Y296 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 SPDYE14P-201ENST00000442619 822 ntBASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 AL139010.1-201ENST00000454878 894 ntBASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 AC243562.2-201ENST00000561247 970 ntBASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 AC027612.4-201ENST00000605371 583 ntBASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 AC006538.3-201ENST00000612495 578 ntBASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 AL390755.1-201ENST00000623716 2027 ntBASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms