Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 AC005562.1-201ENST00000583030 3219 ntBASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.9□□□□□ -0.19
SLIRPQ9GZT3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.9□□□□□ -0.19
SLIRPQ9GZT3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.9□□□□□ -0.19
SLIRPQ9GZT3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.9□□□□□ -0.19
SLIRPQ9GZT3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SLIRPQ9GZT3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 MIR718-201ENST00000390190 70 ntBASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 AL645929.1-201ENST00000420084 975 ntBASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 HOMER2P1-201ENST00000455653 964 ntBASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 AC091076.1-201ENST00000610741 619 ntBASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SLIRPQ9GZT3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 NUTM2HP-201ENST00000442076 2498 ntBASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 AC021097.1-201ENST00000607902 574 ntBASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 AC083849.1-201ENST00000615227 514 ntBASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 Z82170.1-201ENST00000625081 3192 ntBASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 AC130686.1-201ENST00000622936 2466 ntBASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLIRPQ9GZT3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms