Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 AC006058.4-201ENST00000624016 1670 ntBASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 AL133267.1-201ENST00000398220 340 ntBASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 AC009477.1-201ENST00000452936 217 ntBASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 AL355385.1-201ENST00000606123 409 ntBASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCSER1Q9C0I3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCSER1Q9C0I3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms