Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP4Q9BWG4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 AC105250.1-201ENST00000509378 2057 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 HCG4-201ENST00000418983 998 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 KRT16P4-201ENST00000453883 522 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 AC005412.3-201ENST00000580309 715 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 MIR3180-1-201ENST00000580374 94 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 MIR3180-3-201ENST00000584616 94 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 NKAPP1-205ENST00000585790 367 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 AL158211.2-201ENST00000607282 395 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 AL133445.2-201ENST00000611191 527 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 AC005622.1-201ENST00000636801 1703 ntBASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP4Q9BWG4 AC010327.5-201ENST00000586923 3061 ntBASIC12.02□□□□□ -0.48
SSBP4Q9BWG4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.02□□□□□ -0.48
SSBP4Q9BWG4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP4Q9BWG4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP4Q9BWG4 FGD5P1-202ENST00000614866 2498 ntBASIC12.02□□□□□ -0.48
SSBP4Q9BWG4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.02□□□□□ -0.48
SSBP4Q9BWG4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
SSBP4Q9BWG4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.02□□□□□ -0.48
SSBP4Q9BWG4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP4Q9BWG4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AC008677.1-201ENST00000519230 1561 ntBASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 Z97985.1-201ENST00000332270 946 ntBASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AL603841.1-201ENST00000430516 664 ntBASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AC132008.2-207ENST00000454517 770 ntBASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 SLC25A6P2-201ENST00000497974 877 ntBASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AC139887.3-201ENST00000568585 713 ntBASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms