Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 RPSAP36-202ENST00000494591 1261 ntBASIC20.53■□□□□ 0.88
NBPF4Q96M43 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 PRSS30P-206ENST00000641773 873 ntBASIC20.53■□□□□ 0.88
NBPF4Q96M43 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
NBPF4Q96M43 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.53■□□□□ 0.88
NBPF4Q96M43 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NBPF4Q96M43 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 CD8B2-202ENST00000417670 633 ntBASIC20.52■□□□□ 0.88
NBPF4Q96M43 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 HOMER2P2-201ENST00000451621 847 ntBASIC20.52■□□□□ 0.88
NBPF4Q96M43 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 AL022328.3-201ENST00000607943 679 ntBASIC20.52■□□□□ 0.88
NBPF4Q96M43 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 AL008638.5-201ENST00000623814 1298 ntBASIC20.52■□□□□ 0.88
NBPF4Q96M43 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NBPF4Q96M43 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
NBPF4Q96M43 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NBPF4Q96M43 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NBPF4Q96M43 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
NBPF4Q96M43 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NBPF4Q96M43 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 LINC02447-202ENST00000501888 2146 ntBASIC20.51■□□□□ 0.87
NBPF4Q96M43 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 BTBD6P1-201ENST00000412176 1267 ntBASIC20.51■□□□□ 0.87
NBPF4Q96M43 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 AC114812.1-204ENST00000449669 728 ntBASIC20.51■□□□□ 0.87
NBPF4Q96M43 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.51■□□□□ 0.87
NBPF4Q96M43 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NBPF4Q96M43 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms