Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF3Q92576 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF3Q92576 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PHF3Q92576 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF3Q92576 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
PHF3Q92576 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF3Q92576 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.22□□□□□ -0.13
PHF3Q92576 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PHF3Q92576 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.22□□□□□ -0.13
PHF3Q92576 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.22□□□□□ -0.13
PHF3Q92576 FO393414.2-201ENST00000405153 598 ntBASIC14.22□□□□□ -0.13
PHF3Q92576 MEP1AP4-201ENST00000423244 1087 ntBASIC14.22□□□□□ -0.13
PHF3Q92576 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.22□□□□□ -0.13
PHF3Q92576 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.22□□□□□ -0.13
PHF3Q92576 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.22□□□□□ -0.13
PHF3Q92576 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.22□□□□□ -0.13
PHF3Q92576 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.22□□□□□ -0.13
PHF3Q92576 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF3Q92576 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF3Q92576 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.22□□□□□ -0.13
PHF3Q92576 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.22□□□□□ -0.13
PHF3Q92576 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PHF3Q92576 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
PHF3Q92576 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.22□□□□□ -0.13
PHF3Q92576 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.21□□□□□ -0.13
PHF3Q92576 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF3Q92576 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF3Q92576 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PHF3Q92576 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PHF3Q92576 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF3Q92576 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.21□□□□□ -0.13
PHF3Q92576 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF3Q92576 AC011495.1-201ENST00000498085 584 ntBASIC14.21□□□□□ -0.13
PHF3Q92576 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PHF3Q92576 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
PHF3Q92576 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
PHF3Q92576 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.21□□□□□ -0.13
PHF3Q92576 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.21□□□□□ -0.13
PHF3Q92576 AC015936.2-201ENST00000593177 259 ntBASIC14.21□□□□□ -0.13
PHF3Q92576 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.21□□□□□ -0.13
PHF3Q92576 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.21□□□□□ -0.13
PHF3Q92576 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
PHF3Q92576 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.21□□□□□ -0.13
PHF3Q92576 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.21□□□□□ -0.13
PHF3Q92576 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
PHF3Q92576 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF3Q92576 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF3Q92576 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
PHF3Q92576 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PHF3Q92576 KRT8P37-201ENST00000451609 1420 ntBASIC14.21□□□□□ -0.14
PHF3Q92576 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PHF3Q92576 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PHF3Q92576 AC009090.5-201ENST00000624886 2285 ntBASIC14.21□□□□□ -0.14
PHF3Q92576 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PHF3Q92576 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PHF3Q92576 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
PHF3Q92576 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
PHF3Q92576 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.21□□□□□ -0.14
PHF3Q92576 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PHF3Q92576 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
PHF3Q92576 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF3Q92576 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF3Q92576 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.2□□□□□ -0.14
PHF3Q92576 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF3Q92576 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.2□□□□□ -0.14
PHF3Q92576 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.2□□□□□ -0.14
PHF3Q92576 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.2□□□□□ -0.14
PHF3Q92576 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.2□□□□□ -0.14
PHF3Q92576 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
PHF3Q92576 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF3Q92576 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.2□□□□□ -0.14
PHF3Q92576 AL162274.1-201ENST00000617191 1098 ntBASIC14.2□□□□□ -0.14
PHF3Q92576 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF3Q92576 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF3Q92576 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF3Q92576 AC144831.1-201ENST00000573312 2656 ntBASIC14.2□□□□□ -0.14
PHF3Q92576 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF3Q92576 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF3Q92576 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PHF3Q92576 AC134407.2-201ENST00000625089 1978 ntBASIC14.2□□□□□ -0.14
PHF3Q92576 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF3Q92576 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF3Q92576 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF3Q92576 AC092850.2-201ENST00000623821 2697 ntBASIC14.2□□□□□ -0.14
PHF3Q92576 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PHF3Q92576 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PHF3Q92576 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms