Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 AC112693.3-201ENST00000624819 1983 ntBASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.98□□□□□ -0.17
DNAAF1Q8NEP3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 AC145285.3-201ENST00000564603 959 ntBASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 LINC01101-201ENST00000622953 1884 ntBASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.97□□□□□ -0.17
DNAAF1Q8NEP3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 TPM4P1-201ENST00000436100 807 ntBASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DNAAF1Q8NEP3 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms