Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 AC018892.3-201ENST00000623986 2499 ntBASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 HIST3H2BA-201ENST00000436555 524 ntBASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 RN7SL618P-201ENST00000477850 296 ntBASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 HNRNPUP1-201ENST00000554987 333 ntBASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 TEX28P1-201ENST00000613479 1221 ntBASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 TEX28P2-201ENST00000617764 1221 ntBASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 SPDYE12P-201ENST00000618416 771 ntBASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SRFBP1Q8NEF9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 AC097359.3-201ENST00000603982 1210 ntBASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms