Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 AC004987.2-201ENST00000395959 1148 ntBASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 FAM8A3P-201ENST00000427218 844 ntBASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 AC092127.1-201ENST00000567093 3455 ntBASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIMC1Q8NDZ2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 TUBB3P1-201ENST00000405796 1332 ntBASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 AC011467.4-201ENST00000594891 528 ntBASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 AC009090.5-201ENST00000624886 2285 ntBASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 KRT8P37-201ENST00000451609 1420 ntBASIC14.92□□□□□ -0.02
SIMC1Q8NDZ2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIMC1Q8NDZ2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms