Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
XRN1Q8IZH2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC21.33■■□□□ 1
XRN1Q8IZH2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
XRN1Q8IZH2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1
XRN1Q8IZH2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.33■■□□□ 1
XRN1Q8IZH2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
XRN1Q8IZH2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
XRN1Q8IZH2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
XRN1Q8IZH2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.33■■□□□ 1
XRN1Q8IZH2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
XRN1Q8IZH2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
XRN1Q8IZH2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC21.33■■□□□ 1
XRN1Q8IZH2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.33■■□□□ 1
XRN1Q8IZH2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
XRN1Q8IZH2 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC21.32■■□□□ 1
XRN1Q8IZH2 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC21.32■■□□□ 1
XRN1Q8IZH2 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC21.32■■□□□ 1
XRN1Q8IZH2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC21.32■■□□□ 1
XRN1Q8IZH2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.32■■□□□ 1
XRN1Q8IZH2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC21.32■■□□□ 1
XRN1Q8IZH2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
XRN1Q8IZH2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC21.32■■□□□ 1
XRN1Q8IZH2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 RPSAP31-201ENST00000416648 895 ntBASIC21.32■■□□□ 1
XRN1Q8IZH2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC21.32■■□□□ 1
XRN1Q8IZH2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC21.32■■□□□ 1
XRN1Q8IZH2 NOC2LP1-201ENST00000450578 752 ntBASIC21.32■■□□□ 1
XRN1Q8IZH2 CFL1-206ENST00000527344 962 ntTSL 2 BASIC21.32■■□□□ 1
XRN1Q8IZH2 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
XRN1Q8IZH2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC21.32■■□□□ 1
XRN1Q8IZH2 AC073352.2-201ENST00000609385 439 ntBASIC21.32■■□□□ 1
XRN1Q8IZH2 MEG3_2.1-201ENST00000611456 105 ntBASIC21.32■■□□□ 1
XRN1Q8IZH2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC21.32■■□□□ 1
XRN1Q8IZH2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
XRN1Q8IZH2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
XRN1Q8IZH2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC21.32■■□□□ 1
XRN1Q8IZH2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
XRN1Q8IZH2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.31■■□□□ 1
XRN1Q8IZH2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
XRN1Q8IZH2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 VDAC1P1-201ENST00000439229 848 ntBASIC21.31■■□□□ 1
XRN1Q8IZH2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC21.31■■□□□ 1
XRN1Q8IZH2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC21.31■■□□□ 1
XRN1Q8IZH2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
XRN1Q8IZH2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC21.31■■□□□ 1
XRN1Q8IZH2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
XRN1Q8IZH2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
XRN1Q8IZH2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.31■■□□□ 1
XRN1Q8IZH2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
XRN1Q8IZH2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC21.3■■□□□ 1
XRN1Q8IZH2 AC098935.1-201ENST00000446057 611 ntBASIC21.3■■□□□ 1
XRN1Q8IZH2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC21.3■■□□□ 1
XRN1Q8IZH2 AC021723.1-201ENST00000486306 515 ntBASIC21.3■■□□□ 1
XRN1Q8IZH2 HLA-J-204ENST00000495278 958 ntBASIC21.3■■□□□ 1
XRN1Q8IZH2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC21.3■■□□□ 1
XRN1Q8IZH2 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC21.3■■□□□ 1
XRN1Q8IZH2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC21.3■■□□□ 1
XRN1Q8IZH2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC21.3■■□□□ 1
XRN1Q8IZH2 MIR3147-201ENST00000577811 66 ntBASIC21.3■■□□□ 1
XRN1Q8IZH2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC21.3■■□□□ 1
XRN1Q8IZH2 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC21.3■■□□□ 1
XRN1Q8IZH2 AL132994.2-201ENST00000603120 687 ntBASIC21.3■■□□□ 1
XRN1Q8IZH2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC21.3■■□□□ 1
XRN1Q8IZH2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
XRN1Q8IZH2 AC004923.1-202ENST00000642106 209 ntBASIC21.3■■□□□ 1
XRN1Q8IZH2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC21.3■■□□□ 1
XRN1Q8IZH2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC21.3■■□□□ 1
XRN1Q8IZH2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
XRN1Q8IZH2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms