Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 PMPCAP1-201ENST00000508114 1576 ntBASIC13.2□□□□□ -0.3
ZNF546Q86UE3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF546Q86UE3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 TP73-AS1-210ENST00000637775 1455 ntBASIC13.19□□□□□ -0.3
ZNF546Q86UE3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 AC012306.2-201ENST00000609350 630 ntBASIC13.19□□□□□ -0.3
ZNF546Q86UE3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.19□□□□□ -0.3
ZNF546Q86UE3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 AC023024.2-201ENST00000623561 1993 ntBASIC13.19□□□□□ -0.3
ZNF546Q86UE3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF546Q86UE3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 AC063952.2-201ENST00000498792 1227 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms