Protein–RNA interactions for Protein: Q7LGC8

CHST3, Carbohydrate sulfotransferase 3, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3Q7LGC8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 MIR661-201ENST00000384842 89 ntBASIC18.65■□□□□ 0.58
CHST3Q7LGC8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 SPDYE18-201ENST00000510091 1050 ntBASIC18.65■□□□□ 0.58
CHST3Q7LGC8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 AC004840.1-201ENST00000636359 365 ntBASIC18.65■□□□□ 0.58
CHST3Q7LGC8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 AC013268.4-201ENST00000637413 2228 ntBASIC18.65■□□□□ 0.58
CHST3Q7LGC8 AC127383.1-201ENST00000444697 1800 ntBASIC18.65■□□□□ 0.58
CHST3Q7LGC8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.65■□□□□ 0.58
CHST3Q7LGC8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHST3Q7LGC8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.64■□□□□ 0.58
CHST3Q7LGC8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CHST3Q7LGC8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHST3Q7LGC8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 AC002472.2-201ENST00000442739 958 ntBASIC18.64■□□□□ 0.57
CHST3Q7LGC8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 RN7SL204P-201ENST00000582831 262 ntBASIC18.64■□□□□ 0.57
CHST3Q7LGC8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 DBET-201ENST00000630918 3363 ntBASIC18.64■□□□□ 0.57
CHST3Q7LGC8 PPT1-215ENST00000641471 2368 ntBASIC18.64■□□□□ 0.57
CHST3Q7LGC8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHST3Q7LGC8 Z97205.2-201ENST00000564697 1639 ntBASIC18.63■□□□□ 0.57
CHST3Q7LGC8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 AC004790.1-201ENST00000612686 536 ntBASIC18.63■□□□□ 0.57
CHST3Q7LGC8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 AC004461.2-201ENST00000629517 803 ntBASIC18.63■□□□□ 0.57
CHST3Q7LGC8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHST3Q7LGC8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms