Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 AC136621.1-201ENST00000624017 2304 ntBASIC13.81□□□□□ -0.2
FREM1Q5H8C1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.81□□□□□ -0.2
FREM1Q5H8C1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 MEP1AP4-201ENST00000423244 1087 ntBASIC13.8□□□□□ -0.2
FREM1Q5H8C1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 KRT18P43-201ENST00000469825 1281 ntBASIC13.8□□□□□ -0.2
FREM1Q5H8C1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 AC107373.2-201ENST00000607735 490 ntBASIC13.8□□□□□ -0.2
FREM1Q5H8C1 AC093726.1-201ENST00000608064 963 ntBASIC13.8□□□□□ -0.2
FREM1Q5H8C1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.8□□□□□ -0.2
FREM1Q5H8C1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 SNX29P1-201ENST00000548357 1007 ntBASIC13.79□□□□□ -0.2
FREM1Q5H8C1 CR383656.12-201ENST00000549567 513 ntBASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AL049840.4-201ENST00000602422 811 ntBASIC13.79□□□□□ -0.2
FREM1Q5H8C1 RPSAP52-203ENST00000622976 1023 ntBASIC13.79□□□□□ -0.2
FREM1Q5H8C1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AC138969.3-201ENST00000546612 1459 ntBASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AC138932.2-201ENST00000548268 1459 ntBASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AC126755.4-201ENST00000549796 1459 ntBASIC13.79□□□□□ -0.2
FREM1Q5H8C1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.79□□□□□ -0.2
FREM1Q5H8C1 PPT1-215ENST00000641471 2368 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms