Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
TRA2BP62995 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
TRA2BP62995 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRA2BP62995 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRA2BP62995 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 C18orf15-201ENST00000623680 2534 ntBASIC14.87□□□□□ -0.03
TRA2BP62995 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.87□□□□□ -0.03
TRA2BP62995 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.87□□□□□ -0.03
TRA2BP62995 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.87□□□□□ -0.03
TRA2BP62995 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 AC015922.1-201ENST00000421102 1152 ntBASIC14.87□□□□□ -0.03
TRA2BP62995 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.87□□□□□ -0.03
TRA2BP62995 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.87□□□□□ -0.03
TRA2BP62995 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.87□□□□□ -0.03
TRA2BP62995 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
TRA2BP62995 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
TRA2BP62995 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.87□□□□□ -0.03
TRA2BP62995 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRA2BP62995 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRA2BP62995 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRA2BP62995 KRT18P28-201ENST00000453838 1332 ntBASIC14.87□□□□□ -0.03
TRA2BP62995 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRA2BP62995 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.87□□□□□ -0.03
TRA2BP62995 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRA2BP62995 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.86□□□□□ -0.03
TRA2BP62995 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.86□□□□□ -0.03
TRA2BP62995 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.86□□□□□ -0.03
TRA2BP62995 AC084364.1-201ENST00000551967 1556 ntBASIC14.86□□□□□ -0.03
TRA2BP62995 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.86□□□□□ -0.03
TRA2BP62995 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.86□□□□□ -0.03
TRA2BP62995 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.86□□□□□ -0.03
TRA2BP62995 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRA2BP62995 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRA2BP62995 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.86□□□□□ -0.03
TRA2BP62995 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRA2BP62995 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.86□□□□□ -0.03
TRA2BP62995 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 AL133267.1-201ENST00000398220 340 ntBASIC14.86□□□□□ -0.03
TRA2BP62995 TOMM22P5-201ENST00000416399 439 ntBASIC14.86□□□□□ -0.03
TRA2BP62995 RPL13P2-201ENST00000440687 659 ntBASIC14.86□□□□□ -0.03
TRA2BP62995 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.86□□□□□ -0.03
TRA2BP62995 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.86□□□□□ -0.03
TRA2BP62995 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRA2BP62995 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.86□□□□□ -0.03
TRA2BP62995 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.86□□□□□ -0.03
TRA2BP62995 AC093028.1-201ENST00000622998 982 ntBASIC14.86□□□□□ -0.03
TRA2BP62995 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.86□□□□□ -0.03
TRA2BP62995 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TRA2BP62995 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.86□□□□□ -0.03
TRA2BP62995 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TRA2BP62995 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRA2BP62995 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRA2BP62995 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.86□□□□□ -0.03
TRA2BP62995 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRA2BP62995 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRA2BP62995 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
TRA2BP62995 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.85□□□□□ -0.03
TRA2BP62995 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.85□□□□□ -0.03
TRA2BP62995 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRA2BP62995 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRA2BP62995 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRA2BP62995 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRA2BP62995 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRA2BP62995 AL139384.1-201ENST00000612143 3047 ntBASIC14.85□□□□□ -0.03
TRA2BP62995 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.85□□□□□ -0.03
TRA2BP62995 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.85□□□□□ -0.03
TRA2BP62995 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.85□□□□□ -0.03
TRA2BP62995 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.85□□□□□ -0.03
TRA2BP62995 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms